BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A11LP1|AL425628
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1410 1590 0.0
>3x_Contig1410
Length = 7640
Score = 1590 bits (802), Expect = 0.0
Identities = 814/818 (99%)
Strand = Plus / Minus
Query: 1 gtgttgttgttgacccagtcgacagtcccttcttcactatagaacttgatagcgaaccct 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4948 gtgttgttgttgacccagtcgacattcccttcttcactatagaacttgatagcgaaccct 4889
Query: 61 cttgggtcacgtgccgtatcggcagaacccttctcaccaccaacagtactaaatctaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4888 cttgggtcacgtgccgtatcggcagaacccttctcaccaccaacagtactaaatctaaca 4829
Query: 121 aggcatcgcgttctcttccccacggtatcgaacatcgctgaaccgcacacgtccgtgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4828 aggcatcgcgttctcttccccacggtatcgaacatcgctgaaccgcacacgtccgtgata 4769
Query: 181 tcatctgtaatttctaagtacccaaacgcacctgatccatgagcatgagggttacgttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4768 tcatctgtaatttctaagtacccaaacgcacctgatccatgagcatgagggttacgttct 4709
Query: 241 ggaatccgttctctgttgaaatgagctaacgaatcaagaaggttaaaatcctgcaacaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4708 ggaatccgttctctgttgaaatgagctaacgaatcaagaaggttaaaatcctgcaacaac 4649
Query: 301 aaaggaccatgctgtcctacacgttgcgtacaaaatggttcattaattggagcaccttga 360
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4648 aaaggaccatgctgtcctacacgttgcgtagcaaatggttcattaattggagcaccttga 4589
Query: 361 gagtttgtgaccacacggtctttcctaacatccgcagtattagtaggatggcccatggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4588 gagtttgtgaccacacggtctttcctaacatccgcagtattagtaggatggcccatggtt 4529
Query: 421 agaaaaaaattttgcttatgtgttgaatgctatgttcagtaatggttttatactactgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4528 agaaaaaaattttgcttatgtgttgaatgctatgttcagtaatggttttatactactgta 4469
Query: 481 aatataatcaaccgtatcggtaaaagtatgtcgacactatgaatgaagaaacggttacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4468 aatataatcaaccgtatcggtaaaagtatgtcgacactatgaatgaagaaacggttacag 4409
Query: 541 aatcagtcatgatgttatatatatagccctaatatactctgttccattataaataaacga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4408 aatcagtcatgatgttatatatatagccctaatatactctgttccattataaataaacga 4349
Query: 601 gtatttgccaaatgatctccaatccatacaatggatcatctaaattaccatctgtgtaat 660
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4348 gtttttgccaaatgatctccaatccatacaatggatcatctaaattaccatctgtgtaat 4289
Query: 661 ctccaatatcaaaaggaaatggccgctatttgagcctgactcagcaagaggaattgagga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 ctccaatatcaaaaggaaatggccgctatttgagcctgactcagcaagaggaattgagga 4229
Query: 721 taagggatgaacgaatgctgagataacccggaaataacggcttgaggcttctgtaaaggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 taagggatgaacgaatgctgagataacccggaaataacggcttgaggcttctgtaaaggg 4169
Query: 781 caaaagcgaccgcttaaggttttaaggtggcggtagta 818
||||||||||||||||||||||||||||||||||||||
Sbjct: 4168 caaaagcgaccgcttaaggttttaaggtggcggtagta 4131
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5860
Number of Sequences: 1807
Number of extensions: 5860
Number of successful extensions: 23
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)